CisView: Mouse (mm9, Jul 2007)

2991. Region R00023187   U-cluster: U000714   Gene symbol: Tcfcp2l1     transcription factor CP2-like 1
Transcript: U000714-4    Chromosome: chr1    Center: 120524524    TATA position: -31 high quality
List: List for chr1     Data as text: R00023187.txt     Help

Genome Browsers: NCBI - UCSC - Ensembl

Genome Browsers: NCBI - UCSC - Ensembl       Sequence (4kb, fasta)

Warning: some TFBS matches are not shown if there is a better match in the same location

Set viewing options

TFBS (or class of TFBS)
Conservation threshold           Mismatch threshold    
TRANSFAC       MIT       Other
Pattern     Name     Color
Hide nested TFBS with lower score
Use up to 3 user-defined patterns. Patterns should consist of the following upper-case characters
A, T, C, G, Y=[TC], R=[AG], M=[CA], K=[TG], W=[TA], S=[CG],
B=[CTG], D=[ATG], H=[ATC], V=[ACG], N=[ATGC].