CisView: Mouse (mm9, Jul 2007)

1150. Region R00026874   U-cluster: U003212   Gene symbol: Ccrn4l     CCR4 carbon catabolite repression 4-like (S. cerevisiae)
Transcript: U003212-1    Chromosome: chr3    Center: 51028850   
List: List for chr3     Data as text: R00026874.txt     Help

Genome Browsers: NCBI - UCSC - Ensembl

Genome Browsers: NCBI - UCSC - Ensembl       Sequence (4kb, fasta)

Warning: some TFBS matches are not shown if there is a better match in the same location

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TFBS (or class of TFBS)
Conservation threshold           Mismatch threshold    
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Pattern     Name     Color
Hide nested TFBS with lower score
Use up to 3 user-defined patterns. Patterns should consist of the following upper-case characters
A, T, C, G, Y=[TC], R=[AG], M=[CA], K=[TG], W=[TA], S=[CG],
B=[CTG], D=[ATG], H=[ATC], V=[ACG], N=[ATGC].